Publications of Patricia Skowronek

Skowronek, P.; Wallmann, G.; Wahle, M.; Willems, S.; Mann, M.: An accessible workflow for high-sensitivity proteomics using parallel accumulation–serial fragmentation (PASEF). Nature Protocols (2025)

Wahle, M.; Thielert, M.; Zwiebel, M.; Skowronek, P.; Zeng, W.-F.; Mann, M.: IMBAS-MS discovers organ-specific HLA peptide patterns in plasma. Molecular & Cellular Proteomics 23 (1), 100689 (2024)

Rosenberger, F. A.; Thielert, M.; Strauss, M. T.; Schweizer, L.; Ammar, C.; Mädler, S. C.; Metousis, A.; Skowronek, P.; Wahle, M.; Madden, K. et al.; Gote-Schniering, J.; Semenova, A.; Schiller, H. B.; Rodriguez, E.; Nordmann, T. M.; Mund, A.; Mann, M.: Spatial single-cell mass spectrometry defines zonation of the hepatocyte proteome. Nature Methods 20 (10), pp. 1530 - 1536 (2023)

Thielert, M.; Itang, E. C. M.; Ammar, C.; Rosenberger, F. A.; Bludau, I.; Schweizer, L.; Nordmann, T. M.; Skowronek, P.; Wahle, M.; Zeng, W.-F. et al.; Zhou, X.-X.; Brunner, A.-D.; Richter, S.; Levesque, M. P.; Theis, F. J.; Steger, M.; Mann, M.: Robust dimethyl-based multiplex-DIA doubles single-cell proteome depth via a reference channel. Molecular Systems Biology 19 (9), e1150 (2023)

Skowronek, P.; Krohs, F.; Lubeck, M.; Wallmann, G.; Itang, E. C. M.; Koval, P.; Wahle, M.; Thielert, M.; Meier, F.; Willems, S. et al.; Raether, O.; Mann, M.: Synchro-PASEF Allows Precursor-Specific Fragment Ion Extraction and Interference Removal in Data-Independent Acquisition. Molecular & Cellular Proteomics 22 (2), 100489 (2023)

Skowronek, P.; Thielert, M.; Voytik, E.; Tanzer, M. C.; Hansen, F. M.; Willems, S.; Karayel, O.; Brunner, A.-D.; Meier, F.; Mann, M.: Rapid and in-depth coverage of the (phospho-) proteome with deep libraries and optimal window design for dia-PASEF. Molecular & Cellular Proteomics 21 (9), 100279 (2022)

Skowronek, P.: Next-generation proteomics data acquisition for trapped ion mobility mass spectrometers. Dissertation, Ludwig-Maximilians-Universität München, Fakultät für Chemie und Pharmazie, München (2024)

Skowronek, P.: Development of diaPASEF Acquisition methods for high throughput MS-based proteomics and phosphoproteomics. Master, Ludwig-Maximilians-Universität München, Fakultät für Chemie und Pharmazie, München (2021)