Publications of Julia P. Schessner

Strauss, M. T.; Bludau, I.; Zeng, W.-F.; Voytik, E.; Ammar, C.; Schessner, J. P.; Ilango, R.; Gill, M.; Meier, F.; Willems, S. et al.; Mann, M.: AlphaPept: A modern and open framework for MS-based proteomics. Nature Communications 15 (1), 2168 (2024)

Schessner, J. P.; Albrecht, V.; Davies, A. K.; Sinitcyn, P.; Borner, G. H. H.: Deep and fast label-free Dynamic Organellar Mapping. Nature Communications 14 (1), 5252 (2023)

Ammar, C.; Schessner, J. P.; Willems, S.; Michaelis, A. C.; Mann, M.: Accurate Label-Free Quantification by directLFQ to Compare Unlimited Numbers of Proteomes. Molecular & Cellular Proteomics 22 (7), 100581 (2023)

Rodriguez-Silvestre, P.; Laub, M.; Krawczyk, P. A.; Davies, A. K.; Schessner, J. P.; Parveen, R.; Tuck, B. J.; McEwan, W. A.; Borner, G. H.; Kozik, P.: Perforin-2 is a pore-forming effector of endocytic escape in cross-presenting dendritic cells. Science 380 (6651), pp. 1258 - 1265 (2023)

O'Neill, A. C.; Uzbas, F.; Antognolli, G.; Merino, F.; Draganova, K.; Jaeck, A.; Zhang, S.; Pedini, G.; Schessner, J. P.; Cramer, K. et al.; Schepers, A.; Metzger, F.; Esgleas, M.; Smialowski, P.; Guerrini, R.; Falk, S.; Feederle, R.; Freytag, S.; Wang, Z.; Bahlo, M.; Jungmann, R.; Bagni, C.; Borner, G. H. H.; Robertson, S. P.; Hauck, S. M.; Goetz, M.: Spatial centrosome proteome of human neural cells uncovers disease-relevant heterogeneity. Science 376 (6599), eabf9088 (2022)

Schessner, J. P.; Voytik, E.; Bludau, I.: A practical guide to interpreting and generating bottom-up proteomics data visualizations. Proteomics 22 (8), e2100103 (2022)

Martin-Jaular, L.; Nevo, N.; Schessner, J. P.; Tkach, M.; Jouve, M.; Dingli, F.; Loew, D.; Witwer, K. W.; Ostrowski, M.; Borner, G. H. H. et al.; Thery, C.: Unbiased proteomic profiling of host cell extracellular vesicle composition and dynamics upon HIV-1 infection. EMBO Journal 40, e105492 (2021)

Schäfer, J. A.; Schessner, J. P.; Bircham, P. W.; Tsuji, T.; Funaya, C.; Pajonk, O.; Schaeff, K.; Ruffini, G.; Papagiannidis, D.; Knop, M. et al.; Fujimoto, T.; Schuck, S.: ESCRT machinery mediates selective microautophagy of endoplasmic reticulum in yeast. EMBO Journal 39, e102586 (2020)

Yu, S.-H.; Ferretti, D.; Schessner, J. P.; Rudolph, J. D.; Borner, G. H. H.; Cox, J.: Expanding the Perseus Software for Omics Data Analysis With Custom Plugins. Current protocols in bioinformatics 71 (1), e105 (2020)

Schmidt, R. M.; Schessner, J. P.; Borner, G.; Schuck, S.: The proteasome biogenesis regulator Rpn4 cooperates with the unfolded protein response to promote ER stress resistance. eLife 8, e43244 (2019)

Itzhak, D. N.; Schessner, J. P.; Borner, G. H. H.: Dynamic Organellar Maps for Spatial Proteomics. Current protocols in cell biology, e81 (2018)

Schessner, J. P.: Subcellular protein dynamics in cellular models by mass spectrometry-based proteomics. Dissertation, Ludwig-Maximilians-Universität München, Fakultät für Chemie und Pharmazie, München (2024)