Publications

Journal Article (16)

1.
Journal Article
Hickey, K. L.; Panov, A.; Whelan, E. M.; Schäfer, T.; Mizrak, A.; Kopito, R. R.; Baumeister, W.; Fernández-Busnadiego, R.; Harper, J. W.: Temporal control of acute protein aggregate turnover by UBE3C and NRF1-dependent proteasomal pathways. Proceedings of the National Academy of Sciences of the United States of America 121 (50), e2417390121 (2024)
2.
Journal Article
Khavnekar, S.; Erdmann, P. S.; Wan, W.: TOMOMAN: A software package for large-scale cryo-electron tomography data preprocessing, community data sharing and collaborative computing. Journal of Applied Crystallography 57, pp. 2010 - 2016 (2024)
3.
Journal Article
Zinzula, L.; Beck, F.; Camasta, M.; Bohn, S.; Liu, C.; Morado, D.; Bracher, A.; Plitzko, J. M.; Baumeister, W.: Cryo-EM structure of single-layered nucleoprotein-RNA complex from Marburg virus. Nature Communications 15 (1), 10307 (2024)
4.
Journal Article
Wagner, J.; Bracher, A.: Cage-like complexes that protect folding proteins visualized in cells. Nature (2024)
5.
Journal Article
Juhasz, B.; Horvath, K.; Kuti, D.; Shen, J.; Feuchtinger, A.; Zhang, C.; Bata-Vidacs, I.; Nagy, I.; Kukolya, J.; Witting, M. et al.; Baranyi, M.; Ferenczi, S.; Walch, A.; Sun, N.; Kovacs, K. J.: Dipeptide metabolite, glutamyl-glutamate mediates microbe-host interaction to boost spermatogenesis. Scientific Reports 14 (1), 21864 (2024)
6.
Journal Article
Wagner, J.; Carvajal Alvarez, A. I.; Bracher, A.; Beck, F.; Wan, W.; Bohn, S.; Körner, R.; Baumeister, W.; Fernandez-Busnadiego, R.; Hartl, F. U.: Visualizing chaperonin function in situ by cryo-electron tomography. Nature 633 (8029), pp. 459 - 464 (2024)
7.
Journal Article
Schiotz, O. H.; Kaiser, C. J. O.; Klumpe, S.; Morado, D. R.; Poege, M.; Schneider, J.; Beck, F.; Klebl, D. P.; Thompson, C.; Plitzko, J. M.: Serial Lift-Out: Sampling the molecular anatomy of whole organisms. Nature Methods 21 (9), pp. 1684 - 1692 (2024)
8.
Journal Article
Rangan, R.; Feathers, R.; Khavnekar, S.; Lerer, A.; Johnston, J. D.; Kelley, R.; Obr, M.; Kotecha, A.; Zhong, E. D.: CryoDRGN-ET: deep reconstructing generative networks for visualizing dynamic biomolecules inside cells. Nature Methods 21 (8), pp. 1537 - 1545 (2024)
9.
Journal Article
Wang, C.; Jiang, W.; Leitz, J.; Yang, K.; Esquivies, L.; Wang, X.; Shen, X.; Held, R. G.; Adams, D. J.; Basta, T. et al.; Hampton, L.; Jian, R.; Jiang, L.; Stowell, M. H. B.; Baumeister, W.; Guo, Q.; Brunger, A. T.: Structure and topography of the synaptic V-ATPase-synaptophysin complex. Nature 631 (8022), pp. 899 - 904 (2024)
10.
Journal Article
Plattner, H.; Baumeister, W.: Obituary Luis Bachmann An early pioneer of cryo-electron microscopy. Journal of Structural Biology 216 (2), 108069 (2024)
11.
Journal Article
Schneider, J.; Jasnin, M.: Molecular architecture of the actin cytoskeleton: From single cells to whole organisms using cryo-electron tomography. Current Opinion in Cell Biology 88, 102356 (2024)
12.
Journal Article
Zhao, D. Y.; Bäuerlein, F. J. B.; Saha, I.; Hartl, F. U.; Baumeister, W.; Wilfling, F.: Autophagy preferentially degrades non-fibrillar polyQ aggregates. Molecular Cell 84 (10), pp. 1980 - 1994 (2024)
13.
Journal Article
Wan, W.; Khavnekar, S.; Wagner, J.: STOPGAP: an open-source package for template matching, subtomogram alignment and classification. Acta Crystallographica Section D: Structural Biology 80 (5), pp. 336 - 349 (2024)
14.
Journal Article
Hoyer, M. J.; Capitanio, C.; Smith, I. R.; Paoli, J. C.; Bieber, A.; Jiang, Y.; Paulo, J. A.; Gonzalez-Lozano, M. A.; Baumeister, W.; Wilfling, F. et al.; Schulman, B. A.; Harper, J. W.: Combinatorial selective ER-phagy remodels the ER during neurogenesis. Nature Cell Biology 26, pp. 378 - 392 (2024)
15.
Journal Article
Li, W.; Li, A.; Yu, B.; Zhang, X.; Liu, X.; White, K. L.; Stevens, R. C.; Baumeister, W.; Sali, A.; Jasnin, M. et al.; Sun, L.: In situ structure of actin remodeling during glucose-stimulated insulin secretion using cryo-electron tomography. Nature Communications 15 (1), 1311 (2024)
16.
Journal Article
Schwalbe, H.; Audergon, P.; Haley, N.; Amaro, C. A.; Agirre, J.; Baldus, M.; Banci, L.; Baumeister, W.; Blackledge, M.; Carazo, J. M. et al.; Carugo, K. D.; Celie, P.; Felli, I.; Hart, D. J.; Hauß, T.; Lehtiö, L.; Lindorff-Larsen, K.; Márquez, J.; Matagne, A.; Pierattelli, R.; Rosato, A.; Sobott, F.; Sreeramulu, S.; Steyaert, J.; Sussman, J. L.; Trantirek, L.; Weiss, M. S.; Wilmanns, M.: The future of integrated structural biology. Structure 32, pp. 1563 - 1580 (2024)

Thesis - PhD (5)

17.
Thesis - PhD
Schneider, J.: The molecular architecture of cellular actin networks studied by cryo-electron tomography. Dissertation, Technische Universität, School of Natural Sciences, München (2024)
18.
Thesis - PhD
Wagner, J.: Visualizing chaperonin function in protein folding by cryo-electron tomography. Dissertation, Technische Universität, School of Natural Sciences, München (2024)
19.
Thesis - PhD
Bieber, A.: In situ structural analysis of autophagy by correlative cryo-electron tomography. Dissertation, Technische Universität München, School of Natural Sciences (2024)
20.
Thesis - PhD
Collado, J.: Tricalbins maintain plasma membrane integrity by modulating endoplasmic reticulum membrane curvature at ER-PM contact sites. Dissertation, Technische Universität München, School of Natural Sciences, München (2024)
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