Publications of Karl Duderstadt

Kobayashi, W.; Sappler, A. H.; Bollschweiler, D.; Kümmecke, M.; Basquin, J.; Arslantas, E. N.; Ruangroengkulrith, S.; Hornberger, R.; Duderstadt, K.; Tachibana, K.: Nucleosome-bound NR5A2 structure reveals pioneer factor mechanism by DNA minor groove anchor competition. Nature Structural & Molecular Biology 31 (5), pp. 757 - 766 (2024)

Karl, L. A.; Galanti, L.; Bantele, S. C. S.; Metzner, F.; Safaric, B.; Rajappa, L.; Foster, B.; Pires, V. B.; Bansal, P.; Chacin, E. et al.; Basquin, J.; Duderstadt, K. E.; Kurat, C. F.; Bartke, T.; Hopfner, K.-P.; Pfander, B.: A SAM-key domain required for enzymatic activity of the Fun30 nucleosome remodeler. Life science alliance 6 (10), e202201790 (2023)

Huisjes, N. M.; Retzer, T. M.; Scherr, M. J.; Agarwal, R.; Rajappa, L.; Safaric, B.; Minnen, A.; Duderstadt, K. E.: Mars, a molecule archive suite for reproducible analysis and reporting of single-molecule properties from bioimages. eLife 11, e75899 (2022)

Dequeker, B. J. H.; Scherr, M. J.; Brandao, H. B.; Gassler, J.; Powell, S.; Gaspar, I.; Flyamer, I. M.; Lalic, A.; Tang, W.; Stocsits, R. et al.; Davidson, I. F.; Peters, J. M.; Duderstadt, K.; Mirny, L. A.; Tachibana, K.: MCM complexes are barriers that restrict cohesin-mediated loop extrusion. Nature 606 (7912), pp. 197 - 203 (2022)

Safaric, B.; Chacin, E.; Scherr, M. J.; Rajappa, L.; Gebhardt, C.; Kurat, C.; Cordes, T.; Duderstadt, K. E.: The fork protection complex recruits FACT to reorganize nucleosomes during replication. Nucleic Acids Research 50 (3), pp. 1317 - 1334 (2022)

Scherr, M. J.; Abd Wahab, S.; Remus, D.; Duderstadt, K. E.: Mobile origin-licensing factors confer resistance to conflicts with RNA polymerase. Cell Reports 38 (12), 110531 (2022)

Urbanska, M.; Ludecke, A.; Walter, W. J.; van Oijen, A. M.; Duderstadt, K. E.; Diez, S.: Highly-Parallel Microfluidics-Based Force Spectroscopy on Single Cytoskeletal Motors. Small 17 (18), 2007388 (2021)

Bauernfried, S.; Scherr, M. J.; Pichlmair, A.; Duderstadt, K. E.; Hornung, V.: Human NLRP1 is a sensor for double-stranded RNA. Science 371 (6528), eabd0811 (2021)

Agarwal, R.; Duderstadt, K. E.: Multiplex flow magnetic tweezers reveal rare enzymatic events with single molecule precision. Nature Communications 11 (1), 4714 (2020)

van Oijen, A. M.; Duderstadt, K. E.; Xiao, J.; Fishel, R.: Plasticity of Multi-Protein Complexes. Journal of Molecular Biology (London) 430 (22), pp. 4441 - 4442 (2018)

Hill, F. R.; van Oijen, A. M.; Duderstadt, K. E.: Detection of kinetic change points in piece-wise linear single molecule motion. The Journal of Chemical Physics 148 (12), 123317 (2018)

Duderstadt, K. E.: How to Follow a Traveler with a Brownian Swagger. Biophysical Journal 115 (2), pp. 165 - 166 (2018)

Scherr, M. J.; Safaric, B.; Duderstadt, K. E.: Noise in the Machine: Alternative Pathway Sampling is the Rule During DNA Replication. Bioessays 40 (2), 1700159 (2018)

Lewis, J. S.; Spenkelink, L. M.; Jergic, S.; Wood, E. A.; Monachino, E.; Horan, N. P.; Duderstadt, K. E.; Cox, M. M.; Robinson, A.; Dixon, N. E. et al.; van Oijen, A. M.: Single-molecule visualization of fast polymerase turnover in the bacterial replisome. eLife 6, e23932 (2017)

Duderstadt, K. E.; Geertsema, H. J.; Stratmann, S. A.; Punter, C. M.; Kulczyk, A. W.; Richardson, C. C.; van Oijen, A. M.: Simultaneous Real-Time Imaging of Leading and Lagging Strand Synthesis Reveals the Coordination Dynamics of Single Replisomes. Molecular Cell 64 (6), pp. 1035 - 1047 (2016)

Åberg, C.; Duderstadt, K. E.; van Oijen, A. M.: Stability versus exchange: a paradox in DNA replication. Nucleic Acids Research (London) 44 (10), pp. 4846 - 4854 (2016)

Filipović, F.; Retzer, T.; Duderstadt, K.: Isolation and Analysis of Rare Enzymatic Events with Multiplex Flow Magnetic Tweezers. In: Molecular Motors: Methods in Molecular Biology, Vol. 2881, pp. 213 - 238 (Eds. Lavelle, C.; Le Gall, A.). Springer US, New York, NY (2025)

Duderstadt, K.; Agarwal, R.: A Multidimensional DNA Manipulation Platform Enables Massive Parallel Imaging of Replication Fork Dynamics. In Biophysical Journal, 114 (SI 3, Suppl. 1), p. 597A - 597A. 62nd Annual Meeting of the Biophysical-Society, San Francisco, CA, February 17, 2018 - February 21, 2018. Cell Press, Cambridge, Mass. (2018)