Publications of Alexander Auer

Van den Eynde, R.; Hertel, F.; Abakumov, S.; Krajnik, B.; Hugelier, S.; Auer, A.; Hellmeier, J.; Schlichthärle, T.; Grattan, R. M.; Lidke, D. S. et al.; Jungmann, R.; Leutenegger, M.; Vandenberg, W.; Dedecker, P.: Simultaneous multicolor fluorescence imaging using PSF splitting. Nature Methods 21 (10), pp. 1801 - 1805 (2024)

Cramer, K.; Reinhardt, S. C. M.; Auer, A.; Shin, J. Y.; Jungmann, R.: Comparing divisome organization between vegetative and sporulating Bacillus subtilis at the nanoscale using DNA-PAINT. Science Advances 10 (2), eadk5847 (2024)

Huijben, T. A. P. M.; Heydarian, H.; Auer, A.; Schueder, F.; Jungmann, R.; Stallinga, S.; Rieger, B.: Detecting structural heterogeneity in single-molecule localization microscopy data. Nature Communications 12 (1), 3791 (2021)

Auer, A.; Strauss, M. T.; Strauss, S.; Jungmann, R.: nanoTRON: a Picasso module for MLP-based classification of super-resolution data. BIOINFORMATICS 36 (11), pp. 3620 - 3622 (2020)

Wickham, S. F. J.; Auer, A.; Min, J.; Ponnuswamy, N.; Woehrstein, J. B.; Schueder, F.; Strauss, M. T.; Schnitzbauer, J.; Nathwani, B.; Zhao, Z. et al.; Perrault, S. D.; Hahn, J.; Lee, S.; Bastings, M. M.; Helmig, S. W.; Kodal, A. L.; Yin, P.; Jungmann, R.; Shih, W. M.: Complex multicomponent patterns rendered on a 3D DNA-barrel pegboard. Nature Communications 11 (1), 5768 (2020)

Schlichthaerle, T.; Ganji, M.; Auer, A.; Wade, O. K.; Jungmann, R.: Bacterially Derived Antibody Binders as Small Adapters for DNA‐PAINT Microscopy. ChemBioChem: A European Journal of Chemical Biology 20 (8), pp. 1032 - 1038 (2019)

Schlichthaerle, T.; Strauss, M. T.; Schueder, F.; Auer, A.; Nijmeijer, B.; Kueblbeck, M.; Sabinina, V. J.; Thevathasan V, J.; Ries, J.; Ellenberg, J. et al.; Jungmann, R.: Direct visualization of single nuclear pore complex proteins using genetically-encoded probes for DNA-PAINT. Angewandte Chemie International Edition 58 (37, SI), pp. 13004 - 13008 (2019)

Schueder, F.; Stein, J.; Stehr, F.; Auer, A.; Sperl, B.; Strauss, M. T.; Schwille, P.; Jungmann, R.: An order of magnitude faster DNA-PAINT imaging by optimized sequence design and buffer conditions. Nature Methods 16 (11), pp. 1101 - 1104 (2019)

Auer, A.; Schlichthaerle, T.; Woehrstein, J. B.; Schueder, F.; Strauss, M. T.; Grabmayr, H.; Jungmann, R.: Nanometer-scale Multiplexed Super-Resolution Imaging with an Economic 3D-DNA-PAINT Microscope. ChemPhysChem 19 (22), pp. 3024 - 3034 (2018)

Deussner-Helfmann, N. S.; Auer, A.; Strauss, M. T.; Malkusch, S.; Dietz, M. S.; Barth, H. -.; Jungmann, R.; Heilemann, M.: Correlative Single-Molecule FRET and DNA-PAINT Imaging. Nano Letters 18 (7), pp. 4626 - 4630 (2018)

Auer, A.; Strauss, M. T.; Schlichthaerle, T.; Jungmann, R.: Fast, Background-Free DNA-PAINT Imaging Using FRET-Based Probes. Nano Letters 17 (10), pp. 6428 - 6434 (2017)

Deussner-Helfmann, N. S.; Auer, A.; Strauss, M. T.; Donlin-Asp, P.; Malkusch, S.; Dietz, M. S.; Barth, H.-D.; Schuman, E.; Jungmann, R.; Heilemann, M.: Correlating DNA-PAINT and single-molecule FRET for multiplexed super-resolution imaging. In Proceedings of SPIE, 11246, 112460L. SPIE BiOS, San Francisco, CA, February 01, 2020 - February 06, 2020. SPIE, Bellingham, Washington (2020)

Deussner-Helfmann, N.; Auer, A.; Strauss, M.; Malkusch, S.; Dietz, M.; Barth, H. D.; Jungmann, R.; Heilemann, M.: Multiplexed single-molecule fluorescence imaging by FRET-PAINT. In European Biophysics Journal with Biophysics Letters, 48 (Suppl. 1), p. S202 - S202. Joint 12th EBSA European Biophysics Congress / 10th IUPAP International Conference on Biological Physics (ICBP), Madrid, SPAIN, July 20, 2019 - July 24, 2019. Springer, Berlin (2019)

Auer, A.: Developments of molecular tools for DNA sequencing using super-resolution microscopy. Dissertation, Ludwig-Maximilians-Universität München, Fakultät für Physik, München (2022)

Auer, A.: Advancements in Multiplexed 3D Super-Resolution and FRET-based Probes. Master, Ludwig Maximilians Universität, München (2016)