Publications of Florian Gnad

Doll, S.; Gnad, F.; Mann, M.: The Case for Proteomics and Phospho-Proteomics in Personalized Cancer Medicine. PROTEOMICS - Clinical Applications 13 (2, SI), 1800113 (2019)

Borchert, N.; Krug, K.; Gnad, F.; Sinha, A.; Sommer, R. J.; Macek, B.: Phosphoproteome of Pristionchus pacificus Provides Insights into Architecture of Signaling Networks in Nematode Models. MOLECULAR & CELLULAR PROTEOMICS 11 (12 Spec. Iss.), pp. 1631 - 1639 (2012)

Wisniewski, J. R.; Ostasiewicz, P.; Dus, K.; Zielinska, D. F.; Gnad, F.; Mann, M.: Extensive quantitative remodeling of the proteome between normal colon tissue and adenocarcinoma. Molecular Systems Biology 8, 611, pp. [1] - [15] (2012)

Zielinska, D. F.; Gnad, F.; Schropp, K.; Wisniewski, J. R.; Mann, M.: Mapping N-Glycosylation Sites across Seven Evolutionarily Distant Species Reveals a Divergent Substrate Proteome Despite a Common Core Machinery. Molecular Cell 46 (4), pp. 542 - 548 (2012)

Cambridge, S. B.; Gnad, F.; Nguyen, C.; Bermejo, J. L.; Krüger, M.; Mann, M.: Systems-wide Proteomic Analysis in Mammalian Cells Reveals Conserved, Functional Protein Turnover. Journal of Proteome Research 10 (12), pp. 5275 - 5284 (2011)

Marchini, F. K.; de Godoy, L. M. F.; Rampazzo, R. C. P.; Pavoni, D. P.; Probst, C. M.; Gnad, F.; Mann, M.; Krieger, M. A.: Profiling the Trypanosoma cruzi Phosphoproteome. PLoS ONE 6 (9), e25381, pp. [1] - [10] (2011)

Xie, X. Y.; Gong, Z. W.; Mansuy-Aubert, V.; Zhou, Q. L.; Tatulian, S. A.; Sehrt, D.; Gnad, F.; Brill, L. M.; Motamedchaboki, K.; Chen, Y. et al.; Czech, M. P.; Mann, M.; Krüger, M.; Jiang, Z. Y.: C2 Domain-Containing Phosphoprotein CDP138 Regulates GLUT4 Insertion into the Plasma Membrane. Cell Metabolism 14 (3), pp. 378 - 389 (2011)

Gnad, F.; Gunawardena, J.; Mann, M.: PHOSIDA 2011: the posttranslational modification database. Nucleic Acids Research 39 (Suppl. 1), pp. D253 - D260 (2011)

Gnad, F.; Forner, F.; Zielinska, D. F.; Birney, E.; Gunawardena, J.; Mann, M.: Evolutionary Constraints of Phosphorylation in Eukaryotes, Prokaryotes, and Mitochondria. Molecular & Cellular Proteomics 9 (12), pp. 2642 - 2653 (2010)

Zielinska, D. F.; Gnad, F.; Mann, M.; Wisniewski, J. R.: Large Scale Precision Mapping of N-Glycosylation Sites. Glycobiology 20 (11), 8, pp. 1451 - 1452 (2010)

Matic, I.; Schimmel, J.; Hendriks, I. A.; van Santen, M. A.; van de Rijke, F.; van Dam, H.; Gnad, F.; Mann, M.; Vertegaal, A. C. O.: Site-Specific Identification of SUMO-2 Targets in Cells Reveals an Inverted SUMOylation Motif and a Hydrophobic Cluster SUMOylation Motif. Molecular Cell 39 (4), pp. 641 - 652 (2010)

Gnad, F.; Ren, S. B.; Choudhary, C.; Cox, J.; Mann, M.: Predicting post-translational lysine acetylation using support vector machines. Bioinformatics 26 (13), pp. 1666 - 1668 (2010)

Soufi, B.; Kumar, C.; Gnad, F.; Mann, M.; Mijakovic, I.; Macek, B.: Stable Isotope Labeling by Amino Acids in Cell Culture (SILAC) Applied to Quantitative Proteomics of Bacillus subtilis. Journal of Proteome Research 9 (7), pp. 3638 - 3646 (2010)

Wisniewski, J. R.; Nagaraj, N.; Zougman, A.; Gnad, F.; Mann, M.: Brain Phosphoproteome Obtained by a FASP-Based Method Reveals Plasma Membrane Protein Topology. Journal of Proteome Research 9 (6), pp. 3280 - 3289 (2010)

Zielinska, D. F.; Gnad, F.; Wisniewski, J. R.; Mann, M.: Precision Mapping of an In Vivo N-Glycoproteome Reveals Rigid Topological and Sequence Constraints. Cell 141 (5), pp. 897 - 907 (2010)

Olsen, J. V.; Vermeulen, M.; Santamaria, A.; Kumar, C.; Miller, M. L.; Jensen, L. J.; Gnad, F.; Cox, J.; Jensen, T. S.; Nigg, E. A. et al.; Brunak, S.; Mann, M.: Quantitative Phosphoproteomics Reveals Widespread Full Phosphorylation Site Occupancy During Mitosis. Science Signaling 3 (104), ra3, pp. [1] - [15] (2010)

Gnad, F.; de Godoy, L. M. F.; Cox, J.; Neuhauser, N.; Ren, S.; Olsen, J. V.; Mann, M.: High-accuracy identification and bioinformatic analysis of in vivo protein phosphorylation sites in yeast. Proteomics 9 (20), pp. 4642 - 4652 (2009)

Soufi, B.; Olsen, J. V.; Gnad, F.; Kumar, C.; Mann, M.; Mijakovic, I.; Macek, B.: Organization and dynamics of the bacterial Ser/Thr/Tyr phosphoproteome. Amino Acids 37 (4), p. 763 - 763 (2009)

Choudhary, C.; Kumar, C.; Gnad, F.; Nielsen, M. L.; Rehman, M.; Walther, T. C.; Olsen, J. V.; Mann, M.: Lysine Acetylation Targets Protein Complexes and Co-Regulates Major Cellular Functions. Science 325 (5942), pp. 834 - 840 (2009)

Hilger, M.; Bonaldi, T.; Gnad, F.; Mann, M.: Systems-wide Analysis of a Phosphatase Knock-down by Quantitative Proteomics and Phosphoproteomics. Molecular & Cellular Proteomics 8 (8), pp. 1908 - 1920 (2009)